Synonym(s): |
Pneumococcus, pneumococci, pneumococcal, respiratory, invasive, Minnesota ARLN |
Requisition Form |
G-2B |
Test Description |
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Serotype identification by whole genome sequencing (WGS).
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Only isolates of invasive S.pneumoniae from children younger than 5 years old are reportable and accepted by DSHS Lab.
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Isolates submitted by DSHS Lab to Minnesota Dept. of Health AR Lab Network lab for serotyping.
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Test Description
Pre-Approval Needed |
N/A
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Supplemental Information Required |
Please include vaccination history (if known) on back of submission form or attach report to form.
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Performed on Specimens from (sources) |
Human
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Sample/Specimen Type for Testing |
Pure cultured S. pneumoniae isolates from blood and CSF specimens from children younger than 5 years old.
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Minimum Volume/Size Required |
At least one viable colony of pure isolate per plate/slant
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Storage/Preservation Prior to Shipping |
Store at ambient temperatures or refrigerated at 2–8°C until shipment.
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Transport Medium |
Any medium that supports growth of Streptococcus spp. (e.g., blood agar, chocolate agar)
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Specimen Labeling |
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At least two patient identifiers are required on specimen (e.g., patient full name, date of birth, medical record number).
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Three patient identifiers are preferred.
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Patient identifiers on specimen label must exactly match identifiers on submission form. (e.g., abbreviated name on label and full name on form is not acceptable.)
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Additional DSHS Laboratory specimen labeling guidelines available online here.
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Shipping and Specimen Handling Requirements |
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Ship at room temperature or on cold packs. Ship with several cold packs during times of excessive temperatures.
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Ship according to Dangerous Goods Regulations, IATA, and/or CFR 49.
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Category B Biological Substance, UN3373 shipping requirements apply.
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Handle as infectious agent using universal precautions.
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Triple-contain in accordance with federal shipping regulations.
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Submitters are responsible for packaging and shipping specimens according to regulatory requirements.
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Laboratory does not supply collection kits or shipping materials.
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Additional DSHS Laboratory specimen labeling guidelines online here.
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Method |
Whole Genome Sequencing (WGS) |
Turn-around Time |
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Interferences/Limitations |
Specimen must be a viable pure isolate for testing.
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Common Causes for Rejection |
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Isolates are obtained from patients more than 5 years old.
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Mismatch(es) between patient identifiers on G-2B submission form and specimen label.
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Non-viable isolates
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Mixed culture/contamination
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Incorrect storage conditions
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Expired media
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Missing/incomplete/illegible submission form
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Additional Information |
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Invasive Streptococcus pneumoniae infection in children younger than 5 years old is a notifiable condition and isolates are REQUIRED to be submitted to the DSHS Laboratory per Texas Administrative Code (TAC) chapter 97.
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Mark the “IDEAS” box as the payor source on the G-2B form.
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