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Carbapenem Resistant Organisms, Isolate Testing

Laboratory Fee Schedule
Procedure Number: N/A 

Synonym(s):

Carbapenem Resistant Enterobacterales, Carbapenem Resistant Pseudomonas aeruginosa, Carbapenem Resistant Acinetobacter baumanii, CRE, CRPA, CRAB, CRO, ARLN, Carbapenem, Antimicrobial resistance, Antimicrobial Susceptibility Test, PCR, Antimicrobial, MALDI-TOF, mCIM, Broth Micro Dilution

Requisition Form

G-2E

Test Description

Definitive identification of CRO isolates by MALDI-TOF, antimicrobial susceptibility determined by broth micro dilution, and carbapenemase production determination by real-time PCR.

Pre-Approval Needed

N/A 

Supplemental Information Required

  • Antimicrobial susceptibility report from submitter

  • Copies of any previous Lab tests (carbapenemase production or PCR), if available. 

Supplemental Form(s)

N/A

Performed on Specimens from (sources)

Human

Sample/Specimen Type for Testing

  • Pure-cultured CRO isolate from any type of clinical specimen.

  • Pure-cultured CRE isolates resistant to any imipenem, meropenem or ertapenem.

  • Pure-cultured CRPA isolates resistant to at least one imipenem, or meropenem AND non-susceptible (intermediate or resistant) to cefepime or ceftazidime.

  • CRAB isolates resistant to imipenem, or meropenem.

Minimum Volume/Size Required

  • At least one viable pure isolate per plate or slant. 

  • Single tube of pure culture isolate.

Storage/Preservation Prior to Shipping

  • Isolates may be shipped to Laboratory at ambient temperatures

  • Ensure that growth media used does not expire before specimen collection date  

Transport Medium

Isolates should be submitted on a non-inhibitory, non-selective agar plate or/slant or broth.

Specimen Labeling

  • At least two patient identifiers required on specimen (e.g., patient full name, date of birth, medical record number).

  • Three patient identifiers are preferred. 

  • Identifiers on specimen must exactly match identifiers in submission form.

  • Additional DSHS Laboratory specimen labeling guidelines available online here.

Shipping and Specimen Handling Requirements

  • Ship according to Dangerous Goods Regulations, IATA, and/or CFR 49

  • Category B Biological Substance, UN3373 shipping requirements apply

  • Submitters are responsible for packaging and shipping specimens according to regulatory requirements.

  • Additional DSHS Laboratory submission guidelines available online here.

Method

  • Identification of CRE,CRPA, and CRAB by MALDI-TOF.
  • Antimicrobial susceptibility testing by broth micro dilution.
  • Carbapenemase production in CRE and CRPA determined by modified Carbapenem Inactivation Method (mCIM). Carbapenemase producing CRE, CRPA and CRAB identified by real-time PCR.

Turn-around Time

7 working days

Interferences/Limitations

  • Organisms must be viable for culture studies.

  • The results from this test should be used only for epidemiological purposes and not for patient treatment. 

Common Causes for Rejection

  • Mixed culture submitted. 
  • Insufficient specimen growth. 
  • Antimicrobial susceptibility results not provided by submitter.
  • Missing identifiers on specimen and/or submission form.
  • Isolate submitted not a target organism.
  • Media expired at time of isolate culture.
  • Discrepancies between specimen label and submission form.
  • Incomplete, missing, or illegible submission form.
Additional Information

N/A